Ab initio genotype-phenotype association reveals the intrinsic modularity of genetic networks.
Molecular Systems Biology 2006; 2:2006.0005. Epub 2006 Jan 31.
Slonim, N., Elemento, O. and Tavazoie, S.

Revealing posttranscriptional regulatory elements through network-level conservation.
PLoS Computational Biology 2005 Dec; 1(7): e69 Epub 2005 Dec. 9.
Chan, S., Elemento, O. and Tavazoie, S.

Fast and systematic genome-wide discovery of conserved regulatory elements using a non-alignment based approach.
Genome Biology (2005) 6(2):R18. Epub 2005 Jan 26.
Elemento, O. and Tavazoie S.

Predicting gene expression from sequence.
Cell 2004 Apr 16; 117(2):185-98
Beer M.A. and Tavazoie S.

Whole-genome discovery of transcription factor binding sites by network-level conservation.
Genome Research 2004 Jan; 14(1):99-108.
Pritsker, M., Liu, Y., Beer, M. and Tavazoie, S.